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This is solved by compiling PyMongo with C extensions. The MacOS binary comes with these extensions automatically compiled in, Linux installations won’t have them installed if dependencies aren’t met.
Details are here.
In short – install the dependencies:
On Debian:
sudo apt-get install build-essential python-dev
On RedHat:
sudo yum install gcc python-devel
Then reinstall PyMongo with:
pip install --upgrade pymongo
and enjoy the performance improvements.
Source:stackexchange.com